Journal: Molecular cancer research : MCR

Article Title: A Functional Precision Oncology Approach to Identify Treatment Strategies for Myxofibrosarcoma Patients

doi: 10.1158/1541-7786.MCR-21-0255

Figure Lengend Snippet: (A, B) Ex vivo drug testing of the novel patient derived cell model (WCM197) together with the OH931, NMFH-1 and HFF (benign human fibroblasts) using abemaciclib a second line CDK4/6-inhibitor and pralatrexate an antifolate inhibitor in a 6–8-point dilution dose response log scale to determine the IC50 values, highest dose was 10uM and lowest dose was 4.7 pM with an assay time of 96 hours. Greater cytostatic and cytotoxic effect was seen in the cells with the CDKN2A/B and MTAP null status (WCM197 and OH931) compared to CDKN2A/B and MTAP wild type status (NMFH-1 and HFF). (C) The combination of pralatrexate (IC30) and abemaciclib killed all our patient cells within 48 hours compared to the vehicle and abemaciclib and pralatrexate mono-therapy. (D) WCM197 sarco-sphere formation is completely inhibited with the combination of abemaciclib and pralatrexate. (E) Drug combination of abemaciclib and pralatrexate causes massive cell swellings and cytoplasmatic vacuole formation. (F) Cleaved caspase 3 and cleaved PARP at 24, 48 and 72 hours were detected with the combination of abemaciclib and pralatrexate indicating the induction of cell death in the tumor cells after treatment.

Article Snippet: The Human Foreskin Fibroblast (HFF) cells were provided by Dr. Carla Grandori, SEngine Precision Medicine, Seattle, WA, USA as a control specimen for high throughput drug screening ( 22 ).

Techniques: Ex Vivo, Derivative Assay

Journal: Molecular cancer research : MCR

Article Title: A Functional Precision Oncology Approach to Identify Treatment Strategies for Myxofibrosarcoma Patients

doi: 10.1158/1541-7786.MCR-21-0255

Figure Lengend Snippet: (A) High throughput drug screening of all 4 cell strains (HFF, OH931, WCM197, NMFH-1) shown as a heat map (blue is sensitive to red resistant). RB1 wt and CDKN2A/B/MTAP null cells (WCM197 and OH931) show higher sensitivity to CDK4/6 inhibititors such as abemaciclib (indicated by the yellow arrows) and the antifolate pralatrexate and methotrexate (indicated by the green arrows) compared to the CDKN2A/B/MTAP wild type lines (NMFH-1 and HFF). Selective sensitivity to PLK-1 inhibitors was detected in WCM197 and OH931 cells compared to the NMFH-1 and the control line HFF, shown in orange arrows. (B) Graphs show the response of the sarcoma cells to each compound in the library as area under the curve (AUC) compared to the benign human foreskin fibroblast line (HFF) as a normal control. (C-D) Ex vivo drug validation of the two PLK-1 inhibitors (volasertib and rigosertib) confirms high sensitivity for WCM197 and OH931 cells. (E, F) WCM197 3D sarco-spheres are completely inhibited in growth under volasertib treatment and show cell death indicated by cleaved caspase 3, PARP and cleaved PARP. Cell death was monitored with cleaved caspase 3 and cleaved PARP over 96 hours with a peak at 24–72 hours.

Article Snippet: The Human Foreskin Fibroblast (HFF) cells were provided by Dr. Carla Grandori, SEngine Precision Medicine, Seattle, WA, USA as a control specimen for high throughput drug screening ( 22 ).

Techniques: High Throughput Screening Assay, Drug discovery, Control, Ex Vivo, Biomarker Discovery

Journal: International Journal for Parasitology: Drugs and Drug Resistance

Article Title: In vitro activity, safety and in vivo efficacy of the novel bumped kinase inhibitor BKI-1748 in non-pregnant and pregnant mice experimentally infected with Neospora caninum tachyzoites and Toxoplasma gondii oocysts

doi: 10.1016/j.ijpddr.2021.05.001

Figure Lengend Snippet: Structure and in vitro activities of BKI-1748 against N. caninum (Nc-β-gal) and T. gondii (Tg-β-gal). (A) molecular structure of BKI-1748, MW = molecular weight; EC 50 = concentration of half maximal proliferation inhibition; *toxicity levels against human foreskin fibroblasts (HFF) and zebrafish embryos were determined previously [22]. (B,C) Dose-response curves for Neospora and Toxoplasma tachyzoites grown in HFF.

Article Snippet: Human foreskin fibroblasts (HFF; PCS-201-010TM) and BALB/c dermal fibroblasts (CELLNTEC AG, Bern, Switzerland) were maintained as described ( ).

Techniques: In Vitro, Molecular Weight, Concentration Assay, Inhibition

Journal: International Journal for Parasitology: Drugs and Drug Resistance

Article Title: In vitro activity, safety and in vivo efficacy of the novel bumped kinase inhibitor BKI-1748 in non-pregnant and pregnant mice experimentally infected with Neospora caninum tachyzoites and Toxoplasma gondii oocysts

doi: 10.1016/j.ijpddr.2021.05.001

Figure Lengend Snippet: Litter size, parasite burden, neonatal and postnatal mortality rates of N. caninum infected mice treated with BKI-1748.

Article Snippet: Human foreskin fibroblasts (HFF; PCS-201-010TM) and BALB/c dermal fibroblasts (CELLNTEC AG, Bern, Switzerland) were maintained as described ( ).

Techniques: Infection

Journal: Cell Journal (Yakhteh)

Article Title: The Synergistic Effect of Cold Atmospheric Plasma Mediated Gold Nanoparticles Conjugated with Indocyanine Green as An Innovative Approach to Cooperation with Radiotherapy

doi: 10.22074/CELLJ.2022.559078.1097

Figure Lengend Snippet: MTT assay results on melanoma (DFW) and fibroblast (HFF) cell lines at 24 hours. A. The survival rate of DFW and HFF cells incubated with different concentrations of GNP@ICG in 24 hours. The concentration of 10 μM which caused 10% cell death was selected for following treatments. B. The survival percentage of cells treated with radiotherapy. C. The survival percentage of cells treated with CAP. D. The viability of the cells treated to 2 Gy RT following NPs and CAP (30 and 60 seconds) immediately and 24 hours later. Data are shown as the mean ± SD (n=3). A comparison of the difference between each group and the control group was presented as *; P<0.05, **; P<0.01, and ***; P<0.001. CAP; Cold atmospheric plasma, NPs; GNP@ICG, RT; Radiotherapy, 30s+2Gy/0h; Combined therapy 30-seconds CAP and 2 Gy radiation immediately, 30s+2Gy/24h; Ccombined therapy 30-seconds CAP and 2 Gy radiation with 24 hours interval, 60 s+2Gy/0h; Combined therapy 60-seconds CAP and 2 Gy radiation immediately, and 60s+2Gy/24h; Combined therapy 60-seconds CAP and 2 Gy radiation with 24 hours interval.

Article Snippet: DFW (human melanoma cell line, C496) and HFF (normal human foreskin fibroblast cell line, C163) were purchased from Pasteur Institute in Iran.

Techniques: MTT Assay, Incubation, Concentration Assay

Journal: Cell Journal (Yakhteh)

Article Title: The Synergistic Effect of Cold Atmospheric Plasma Mediated Gold Nanoparticles Conjugated with Indocyanine Green as An Innovative Approach to Cooperation with Radiotherapy

doi: 10.22074/CELLJ.2022.559078.1097

Figure Lengend Snippet: Flow cytometry results of DFW and HFF cell lines. A. The Annexin-V-FITC assay for detecting the apoptosis and necrosis of DFW cells, B. The diagram of the percentage of apoptotic and necrotic of DFW cells after treatment with different groups, C. The Annexin-V-FITC assay for detecting the apoptosis and necrosis of HFF cells, and D. The diagram of percentage of apoptotic and necrotic of HFF cells in different groups. DFW; Melanoma cell line, HFF; Health foreskin fibroblast, CAP; Cold atmospheric plasma, NPs; GNP@ICG, RT; Radiotherapy, 30s+2Gy/0h; Combined therapy 30-seconds CAP and 2 Gy radiation immediately, 30s+2Gy/24h; Ccombined therapy 30-seconds CAP and 2 Gy radiation with 24 hours interval, 60 s+2Gy/0h; Combined therapy 60-seconds CAP and 2 Gy radiation immediately, and 60s+2Gy/24h; Combined therapy 60-seconds CAP and 2 Gy radiation with 24 hours interval.

Article Snippet: DFW (human melanoma cell line, C496) and HFF (normal human foreskin fibroblast cell line, C163) were purchased from Pasteur Institute in Iran.

Techniques: Flow Cytometry